6WUQ
Crystal structure of AjiA1 in apo form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-12-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.976195 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 128.777, 128.777, 101.449 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 33.816 - 2.003 |
R-factor | 0.1898 |
Rwork | 0.188 |
R-free | 0.22360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2y27 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.924 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.27) |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.870 | 48.870 | 2.050 |
High resolution limit [Å] | 2.000 | 9.180 | 2.000 |
Rmerge | 0.067 | 0.027 | 2.573 |
Rmeas | 0.069 | 0.028 | 2.637 |
Rpim | 0.015 | 0.007 | 0.576 |
Total number of observations | 1320343 | 12726 | 92631 |
Number of reflections | 65461 | 757 | 4483 |
<I/σ(I)> | 24.4 | 95.6 | 1.7 |
Completeness [%] | 99.8 | 99.4 | 97.9 |
Redundancy | 20.2 | 16.8 | 20.7 |
CC(1/2) | 1.000 | 1.000 | 0.688 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291.15 | 35% PEG 300, 100 mM Potassium Citrate Phosphate |