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6WQP

GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyCCD
Collection date2013-10-13
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.978560
Spacegroup nameP 1 21 1
Unit cell lengths49.980, 85.850, 87.200
Unit cell angles90.00, 96.54, 90.00
Refinement procedure
Resolution45.370 - 1.600
R-factor0.2038
Rwork0.203
R-free0.24220
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4im4
RMSD bond length0.005
RMSD bond angle0.790
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.3701.657
High resolution limit [Å]1.6001.600
Rmerge0.1070.717
Rmeas0.1240.821
Rpim0.0620.395
Number of reflections942989451
<I/σ(I)>8.311.54
Completeness [%]97.698.49
Redundancy4.14.2
CC(1/2)0.9930.681
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7293Crystals were grown from protein solution mixed with an equal volume of reservoir solution, 0.5% Jeffamine, 100 mM HEES pH 7.0, and 1.1 pM Sodium Malonate H 7.0 (Hampton Index HT screen: C9) in a SD2 format microplate set with a TTP Labtech Mosquito robot. Crystals were cryoprotected with 1.0% Jeffamine, 100 mM HEES pH 7.0, 1.1 M Sodium Malonate pH 7.0, and 20% ethylene glycol

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PDB entries from 2024-05-15

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