6WQP
GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-10-13 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.978560 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.980, 85.850, 87.200 |
Unit cell angles | 90.00, 96.54, 90.00 |
Refinement procedure
Resolution | 45.370 - 1.600 |
R-factor | 0.2038 |
Rwork | 0.203 |
R-free | 0.24220 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4im4 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.790 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.370 | 1.657 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.107 | 0.717 |
Rmeas | 0.124 | 0.821 |
Rpim | 0.062 | 0.395 |
Number of reflections | 94298 | 9451 |
<I/σ(I)> | 8.31 | 1.54 |
Completeness [%] | 97.6 | 98.49 |
Redundancy | 4.1 | 4.2 |
CC(1/2) | 0.993 | 0.681 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | Crystals were grown from protein solution mixed with an equal volume of reservoir solution, 0.5% Jeffamine, 100 mM HEES pH 7.0, and 1.1 pM Sodium Malonate H 7.0 (Hampton Index HT screen: C9) in a SD2 format microplate set with a TTP Labtech Mosquito robot. Crystals were cryoprotected with 1.0% Jeffamine, 100 mM HEES pH 7.0, 1.1 M Sodium Malonate pH 7.0, and 20% ethylene glycol |