Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6WQI

Xanthomonas citri Methionyl-tRNA synthetase (apo)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsLNLS BEAMLINE W01B-MX2
Synchrotron siteLNLS
BeamlineW01B-MX2
Temperature [K]100
Detector technologyPIXEL
Collection date2017-04-07
DetectorDECTRIS PILATUS 2M
Wavelength(s)1.4586
Spacegroup nameP 1 21 1
Unit cell lengths74.017, 95.253, 84.080
Unit cell angles90.00, 90.52, 90.00
Refinement procedure
Resolution47.830 - 2.000
R-factor0.1874
Rwork0.185
R-free0.23010
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6wq6
RMSD bond length0.015
RMSD bond angle1.657
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER (2.8.3)
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.8302.040
High resolution limit [Å]2.0002.000
Rmerge0.1070.918
Rmeas0.1271.107
Rpim0.0690.609
Number of reflections762384423
<I/σ(I)>8.6
Completeness [%]97.095
Redundancy3.33.1
CC(1/2)0.9960.574
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2910.1 M Tris-HCl, 28 - 32% PEG4000, 0.2 M MgCl2, 0.45 % Polyvinylpyrrolidone K15

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon