6WPU
Structure of S-allyl-L-cysteine S-oxygenase from Allium sativum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-08-02 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.97910 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 139.717, 139.717, 77.873 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 120.998 - 2.084 |
R-factor | 0.1796 |
Rwork | 0.178 |
R-free | 0.20370 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.14) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 121.000 | 121.000 | 2.140 |
High resolution limit [Å] | 2.080 | 9.080 | 2.080 |
Rmerge | 0.126 | 0.030 | 1.673 |
Rmeas | 0.132 | 0.032 | 1.765 |
Rpim | 0.039 | 0.010 | 0.555 |
Total number of observations | 6868 | 38452 | |
Number of reflections | 101059 | 706 | 3905 |
<I/σ(I)> | 15.6 | 60.7 | 1.6 |
Completeness [%] | 99.7 | 100 | 96.7 |
Redundancy | 11.1 | 9.7 | 9.8 |
CC(1/2) | 0.999 | 0.999 | 0.642 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 1.7 M ammonium sulfate, 0.1 M HEPES pH 7.5, and 0.0025 M NaCl |