6WO4
Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody HC11
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-07 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.706, 67.111, 222.296 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.368 - 2.349 |
R-factor | 0.2102 |
Rwork | 0.209 |
R-free | 0.23640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6wo3 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.643 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.390 |
High resolution limit [Å] | 2.349 | 2.349 |
Number of reflections | 36627 | 1693 |
<I/σ(I)> | 25.7 | |
Completeness [%] | 94.5 | |
Redundancy | 9.1 | |
CC(1/2) | 0.920 | 0.570 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 293 | 0.16 M ammonium sulfate, 20% (w/v) PEG 4000, 20% (v/v) glycerol, 0.08 M sodium acetate, pH 4.6 |