6WM7
Periplasmic EDTA-binding protein EppA, orthorhombic
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2019-03-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 84.339, 90.607, 165.266 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.456 - 1.560 |
R-factor | 0.1524 |
Rwork | 0.152 |
R-free | 0.17070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1vr5 |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.570 |
High resolution limit [Å] | 1.560 | 5.330 | 1.560 |
Rmerge | 0.125 | 0.040 | 1.608 |
Rmeas | 0.130 | 0.042 | 1.855 |
Rpim | 0.035 | 0.011 | 0.895 |
Total number of observations | 2422624 | ||
Number of reflections | 179522 | 4858 | 4156 |
<I/σ(I)> | 7.9 | ||
Completeness [%] | 99.8 | 100 | 93.9 |
Redundancy | 13.5 | 14.2 | 3.6 |
CC(1/2) | 0.999 | 0.250 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 297 | 100 mM Tris, 2.0 M ammonium sulfate |