6WJP
Crystal structure of Arginine Repressor P115Q mutant from the pathogenic bacterium Corynebacterium pseudotuberculosis bound to arginine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE W01B-MX2 |
Synchrotron site | LNLS |
Beamline | W01B-MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-08-25 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.4586 |
Spacegroup name | P 21 3 |
Unit cell lengths | 83.341, 83.341, 83.341 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.271 - 1.701 |
R-factor | 0.1805 |
Rwork | 0.173 |
R-free | 0.19720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jvo |
RMSD bond length | 0.008 |
RMSD bond angle | 0.936 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.271 | 1.800 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.055 | 2.587 |
Rmeas | 0.056 | 2.656 |
Number of reflections | 21469 | 3400 |
<I/σ(I)> | 48.98 | 1.15 |
Completeness [%] | 99.9 | 99.5 |
Redundancy | 35.1 | 19.4 |
CC(1/2) | 1.000 | 0.369 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291.15 | 2.0 M Sodium Formate, pH 7.5 |