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6WI4

Caspases from Scleractinian Coral

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2018-08-16
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths74.416, 86.848, 93.666
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.400 - 1.570
R-factor0.178
Rwork0.177
R-free0.20900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2j30
Data reduction softwareDENZO
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.600
High resolution limit [Å]1.5704.2601.570
Rmerge0.2180.1121.461
Rmeas0.2490.1271.642
Rpim0.1170.0590.733
Total number of observations415894
Number of reflections8418243744176
<I/σ(I)>9
Completeness [%]98.895.899.5
Redundancy4.95.25
CC(1/2)0.9770.255
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5291Protein crystalized in a solution of 0.1 M sodium malonate pH 5.0, 12% w/v polyethylene glycol (PEG) 3350, and conditions were optimized such that the best diffracting crystals of PaCasp7a were obtained at 18 C in a solution of 0.1 M sodium malonate, pH 4.9-5.1, 15-17% PEG 3350 (w/v), 10 mM DTT, and 3 mM NaN3. Crystals for PaCasp7a appeared within 3 to 5 days and were briefly immersed in a cryogenic solution containing 20% PEG 4000, 80% reservoir solution

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