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6WGQ

The crystal structure of a beta-lactamase from Shigella flexneri 2a str. 2457T

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2020-03-03
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.97918
Spacegroup nameP 1 21 1
Unit cell lengths46.419, 73.767, 109.512
Unit cell angles90.00, 92.40, 90.00
Refinement procedure
Resolution46.380 - 1.800
R-factor0.1546
Rwork0.153
R-free0.19160
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6dpz
RMSD bond length0.007
RMSD bond angle0.856
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareHKL-3000
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.4001.830
High resolution limit [Å]1.8001.800
Rmerge0.1160.559
Rmeas0.1340.680
Rpim0.0670.377
Number of reflections666782899
<I/σ(I)>19.12.4
Completeness [%]98.286.5
Redundancy3.82.8
CC(1/2)0.9880.661
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52890.1M HEPES:NaOH 30% (w/v) PEG 1000

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