6W8B
Structure of DNMT3A in complex with CGA DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-01 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | .5 |
Spacegroup name | P 32 |
Unit cell lengths | 186.347, 186.347, 81.671 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.871 - 2.400 |
R-factor | 0.2124 |
Rwork | 0.212 |
R-free | 0.23260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5yx2 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.900 | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Number of reflections | 123917 | 123895 |
<I/σ(I)> | 10 | |
Completeness [%] | 99.9 | |
Redundancy | 5.1 | |
CC(1/2) | 0.999 | 0.644 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 0.1 M Sodium Citrate pH 4.2, 1% PEG8000 |