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6VU6

Sialic acid binding region of Streptococcus Sanguinis SK1 adhesin bound to 3'sLn

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2017-12-05
DetectorRAYONIX MX-300
Wavelength(s)0.9795
Spacegroup nameP 21 21 2
Unit cell lengths82.213, 269.859, 47.511
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.100 - 2.100
R-factor0.2257
Rwork0.225
R-free0.24770
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6vs7
RMSD bond length0.018
RMSD bond angle1.784
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.180
High resolution limit [Å]2.1002.100
Number of reflections559424057
<I/σ(I)>16.264
Completeness [%]92.4
Redundancy4.3
CC(1/2)0.727
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.6298Protein concentration: 72 mg/mL, Protein buffer: 150 mM NaCl, 20 mM tris pH 7.6, Reservoir solution: 20% (w/v) PEG 3350, 0.2 M MgSO4, 0.01 M SrCl2. Crystals were soaked with 10mM 3'-sialyl-N-acetyllactosamine, 20% (w/v) PEG 3350, 0.2 M MgSO4, 0.01 M SrCl2. Cryoprotectant: 40% (1:1 ethylene glycol:glycerol) and 60% reservoir solution

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