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6VT2

Sialic acid binding region of Streptococcus sanguinis SK1 adhesin bound to sTa

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2017-12-05
DetectorRAYONIX MX-300
Wavelength(s)0.97946
Spacegroup nameP 21 21 2
Unit cell lengths82.213, 269.859, 47.511
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.660 - 1.520
R-factor0.1778
Rwork0.177
R-free0.19300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6vs7
RMSD bond length0.022
RMSD bond angle1.635
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.18.2_3874+SVN)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.580
High resolution limit [Å]1.5201.550
Number of reflections1489609822
<I/σ(I)>26.6
Completeness [%]93.161
Redundancy4.32.8
CC(1/2)0.723
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.6298Protein concentration: 72 mg/mL, Protein buffer: 150 mM NaCl, 20 mM tris pH 7.6, Reservoir solution: 20% (w/v) PEG 3350, 0.2 M MgSO4, 0.01 M SrCl2. Crystals were soaked with 10 mM sTa and cryoprotected with 40% (1:1 ethylene glycol: glycerol) and 60% reservoir solution

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