6VNX
Crystal structure of TYK2 kinase with compound 19
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-02-27 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.406, 73.559, 103.825 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 51.910 - 2.180 |
R-factor | 0.1963 |
Rwork | 0.194 |
R-free | 0.23830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3lxp |
RMSD bond length | 0.010 |
RMSD bond angle | 1.140 |
Data scaling software | SCALA (3.3.16) |
Refinement software | BUSTER (2.11.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 103.825 | 103.825 | 2.300 |
High resolution limit [Å] | 2.179 | 6.890 | 2.180 |
Rmerge | 0.039 | 0.284 | |
Rmeas | 0.108 | 0.047 | 0.374 |
Rpim | 0.045 | 0.021 | 0.178 |
Total number of observations | 78551 | 2970 | 6365 |
Number of reflections | 14813 | 565 | 1870 |
<I/σ(I)> | 12.7 | 32.2 | 3.1 |
Completeness [%] | 97.3 | 99.6 | 86 |
Redundancy | 5.3 | 5.3 | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 8 | 298 | 0.1 M bis-tris pH 5.5, 0.25 M NaCl, 10 mM TCEP, 27-33% PEG-3350 |