6VJF
The P-Loop K to A mutation of C. therm Vps1 GTPase-BSE
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 1998-11-14 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.91299 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 81.873, 119.032, 84.576 |
Unit cell angles | 90.00, 100.95, 90.00 |
Refinement procedure
Resolution | 80.380 - 2.472 |
R-factor | 0.19093 |
Rwork | 0.189 |
R-free | 0.23810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6def |
RMSD bond length | 0.016 |
RMSD bond angle | 1.966 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 80.380 | 2.540 |
High resolution limit [Å] | 2.470 | 2.470 |
Rmerge | 0.063 | 0.415 |
Rmeas | 0.067 | 0.445 |
Rpim | 0.024 | 0.157 |
Number of reflections | 56551 | 4608 |
<I/σ(I)> | 17.3 | 5.3 |
Completeness [%] | 99.3 | 99.5 |
Redundancy | 7.4 | 7.8 |
CC(1/2) | 0.998 | 0.954 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.1 | 293 | 91 mM HEPES pH 8.1 16.7 % PEG 3,350 182 mM Sodium Acetate 3% PROPAN-2-OL |