6VHR
Structure of PE5-PPE4-EspG3 complex from the type VII (ESX-3) secretion system, space group I422
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-06-05 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.0000 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 219.090, 219.090, 104.430 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.727 - 3.300 |
R-factor | 0.2485 |
Rwork | 0.248 |
R-free | 0.26620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2g38 4l4w |
RMSD bond length | 0.002 |
RMSD bond angle | 0.503 |
Data reduction software | XDS (VERSION Jan 26, 2018 BUILT=20180319) |
Data scaling software | XSCALE (VERSION Jan 26, 2018 BUILT=20180319) |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.727 | 35.727 | 3.390 |
High resolution limit [Å] | 3.300 | 14.760 | 3.300 |
Rmerge | 0.087 | 0.037 | 2.182 |
Rmeas | 0.091 | 0.040 | 2.308 |
Number of reflections | 19380 | 239 | 1406 |
<I/σ(I)> | 15.7 | 45.33 | 1.31 |
Completeness [%] | 99.8 | 90.2 | 100 |
Redundancy | 10.295 | 7.498 | 9.533 |
CC(1/2) | 0.999 | 0.999 | 0.597 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 2M sodium chloride, 0.1M BIS-TRIS |