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6VHD

FphF, Staphylococcus aureus fluorophosphonate-binding serine hydrolases F, KT129 bound

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyPIXEL
Collection date2019-07-31
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.954
Spacegroup nameP 61 2 2
Unit cell lengths87.202, 87.202, 455.197
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution49.280 - 1.980
R-factor0.178
Rwork0.176
R-free0.21310
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6vh9
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (dev-3699)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.28049.2802.020
High resolution limit [Å]1.9809.7001.980
Rmerge0.1510.0372.676
Rmeas0.1540.0382.730
Rpim0.0290.0080.535
Total number of observations16651107296
Number of reflections730408094307
<I/σ(I)>16.763.11.5
Completeness [%]99.999.498.5
Redundancy27.120.624.9
CC(1/2)0.9991.0000.711
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5289.150.2 uL ~7.5 mg/ml FphF+KT129 (0.12mM KT129, 12% DMSO, 18 mM HEPES pH 7.5, 8 mM NaCl) were mixed with 0.2 uL of reservoir solution. Sitting drop reservoir contained 50 uL of 0.2 M Sodium citrate, 0.1 M Bis-Tris propane pH 6.5, 20% w/v PEG 3350. Crystals were soaked for ~20 seconds in 75% reservoir solution and 25% glycerol prior to freezing in liquid nitrogen

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