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6VEH

Computationally designed C3-symmetric homotrimer from HEAT repeat protein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.1
Synchrotron siteALS
Beamline5.0.1
Temperature [K]100
Detector technologyCCD
Collection date2016-02-10
DetectorADSC QUANTUM 315r
Wavelength(s)0.977408
Spacegroup nameH 3
Unit cell lengths88.182, 88.182, 65.244
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution44.091 - 2.303
R-factor0.2045
Rwork0.202
R-free0.22610
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Computational design model
Data reduction softwareHKL-2000 (714n)
Data scaling softwareHKL-2000 (714n)
Phasing softwarePHASER (2.8.2)
Refinement softwarePHENIX (dev_3112)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]100.000100.0002.340
High resolution limit [Å]2.3006.2402.300
Rmerge0.1190.0331.198
Rmeas0.1310.0361.341
Rpim0.0550.0150.598
Total number of observations46905
Number of reflections8361419388
<I/σ(I)>6.2
Completeness [%]100.099.8100
Redundancy5.65.85
CC(1/2)0.9990.619
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291.151mM DL-glutamic acid monohydrate, 100mM DL-alanine, 100mM glycine, 100mM DL-lysine monohydrochloride, 100mM DL-serine, 100mM Tris (base), 100mM BICINE, 20% (v/v) ethylene glycol, 10 % (w/v) PEG 8000, pH8.5

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PDB entries from 2024-05-15

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