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6VC6

2.1 Angstrom Resolution Crystal Structure of 6-phospho-alpha-glucosidase from Gut Microorganisms in Complex with NAD and Mn2+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2019-10-27
DetectorADSC QUANTUM 315r
Wavelength(s)0.9793
Spacegroup nameC 1 2 1
Unit cell lengths194.460, 62.257, 160.706
Unit cell angles90.00, 90.35, 90.00
Refinement procedure
Resolution48.614 - 2.133
R-factor0.1977
Rwork0.196
R-free0.22860
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6dvv
RMSD bond length0.004
RMSD bond angle0.772
Data reduction softwareHKL-3000
Data scaling softwareSCALEPACK
Phasing softwareHKL-3000
Refinement softwarePHENIX (1.11.1-2575_1309)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.180
High resolution limit [Å]2.1305.8102.130
Rmerge0.1200.1030.634
Rmeas0.1350.1160.720
Rpim0.0600.0530.334
Number of reflections10657055525239
<I/σ(I)>5.3
Completeness [%]99.499.298.3
Redundancy4.84.74.3
CC(1/2)0.9830.742
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52970.6M Sodium Chloride, 0.1M MES:NaOH, 20% PEG4000

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