6VC5
1.6 Angstrom Resolution Crystal Structure of endoglucanase from Komagataeibacter sucrofermentans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-10-15 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9793 |
Spacegroup name | I 4 |
Unit cell lengths | 120.520, 120.520, 47.588 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.112 - 1.500 |
R-factor | 0.1564 |
Rwork | 0.155 |
R-free | 0.17560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1wzz |
RMSD bond length | 0.008 |
RMSD bond angle | 1.079 |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | HKL-3000 |
Refinement software | PHENIX (1.11.1-2575_1309) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.530 |
High resolution limit [Å] | 1.495 | 4.070 | 1.500 |
Rmerge | 0.093 | 0.056 | 1.306 |
Rmeas | 0.103 | 0.062 | 1.557 |
Rpim | 0.044 | 0.025 | 0.834 |
Number of reflections | 55405 | 2874 | 2744 |
<I/σ(I)> | 9.7 | ||
Completeness [%] | 99.8 | 99.7 | 99.3 |
Redundancy | 5.1 | 5.6 | 3.1 |
CC(1/2) | 0.991 | 0.216 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 297 | 0.6M NaCl, 0.1M MES.NaOH, pH6.5, 20% PEG4000 |