Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6VC5

1.6 Angstrom Resolution Crystal Structure of endoglucanase from Komagataeibacter sucrofermentans

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2019-10-15
DetectorADSC QUANTUM 315r
Wavelength(s)0.9793
Spacegroup nameI 4
Unit cell lengths120.520, 120.520, 47.588
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.112 - 1.500
R-factor0.1564
Rwork0.155
R-free0.17560
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1wzz
RMSD bond length0.008
RMSD bond angle1.079
Data reduction softwareHKL-3000
Data scaling softwareSCALEPACK
Phasing softwareHKL-3000
Refinement softwarePHENIX (1.11.1-2575_1309)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.530
High resolution limit [Å]1.4954.0701.500
Rmerge0.0930.0561.306
Rmeas0.1030.0621.557
Rpim0.0440.0250.834
Number of reflections5540528742744
<I/σ(I)>9.7
Completeness [%]99.899.799.3
Redundancy5.15.63.1
CC(1/2)0.9910.216
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52970.6M NaCl, 0.1M MES.NaOH, pH6.5, 20% PEG4000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon