6V84
CFTR Associated Ligand (CAL) PDZ domain bound to peptidomimetic LyCALAc
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-10 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.8263 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.568, 47.741, 97.448 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.240 - 1.640 |
R-factor | 0.1813 |
Rwork | 0.180 |
R-free | 0.21310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4nmo |
RMSD bond length | 0.011 |
RMSD bond angle | 1.304 |
Data reduction software | XDS (Version Novermber 1, 2016) |
Data scaling software | XSCALE (Version Novermber 1, 2016) |
Phasing software | PHENIX (v1.17.1-3660) |
Refinement software | PHENIX (v1.17.1-3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 10.000 | 1.750 |
High resolution limit [Å] | 1.640 | 7.000 | 1.640 |
Rmerge | 0.095 | 0.052 | 0.298 |
Rmeas | 0.105 | 0.058 | 0.336 |
Number of reflections | 20936 | 205 | 3460 |
<I/σ(I)> | 14.45 | 25.26 | 5.37 |
Completeness [%] | 96.8 | 98.1 | 91.8 |
Redundancy | 5.59 | 5.33 | 4.49 |
CC(1/2) | 0.995 | 0.997 | 0.944 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 5.5 mg/mL CAL PDZ, 1 mM LyCALAc peptide, 35% (w/v) PEG 8000, 150 mM NaCl, 100 mM Tris pH 7.5 |