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6V5K

Crystal structure of human DNA polymerase eta complexed with N7-nitrogen half-mustard guanine (NHMG) and dCTP*

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]120
Detector technologyPIXEL
Collection date2018-10-14
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1
Spacegroup nameP 61
Unit cell lengths98.911, 98.911, 82.138
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution49.460 - 2.690
Rwork0.188
R-free0.24240
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4o3n
RMSD bond length0.010
RMSD bond angle1.258
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwarePHENIX (1.15rc3_3435)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.730
High resolution limit [Å]2.6902.690
Rpim0.0590.569
Number of reflections12870651
<I/σ(I)>12.40.93
Completeness [%]99.5
Redundancy10.3
CC(1/2)0.469
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293PEG2K-MME, MnCl2, MES, pH 6.0

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