6V1D
Crystal structure of human trefoil factor 1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
| Synchrotron site | Australian Synchrotron |
| Beamline | MX2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-02-22 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.9536 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 44.928, 41.905, 45.831 |
| Unit cell angles | 90.00, 115.57, 90.00 |
Refinement procedure
| Resolution | 41.344 - 2.400 |
| R-factor | 0.1957 |
| Rwork | 0.194 |
| R-free | 0.22590 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2psp |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.7.4) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 41.344 | 41.340 | 2.490 |
| High resolution limit [Å] | 2.400 | 8.980 | 2.400 |
| Rmerge | 0.266 | 0.099 | 0.983 |
| Rmeas | 0.317 | 0.118 | 1.167 |
| Rpim | 0.171 | 0.063 | 0.623 |
| Total number of observations | 362 | 2067 | |
| Number of reflections | 6054 | 126 | 611 |
| <I/σ(I)> | 2.7 | 4.6 | 1 |
| Completeness [%] | 98.6 | 98.2 | 97.3 |
| Redundancy | 3.3 | 2.9 | 3.4 |
| CC(1/2) | 0.958 | 0.991 | 0.570 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 1 M ammonium sulfate, 0.1 M Tris-HCl, pH 8.5 |






