6UVM
Cocrystal of BRD4(D1) with a methyl carbamate thiazepane inhibitor
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-01 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 37.359, 44.240, 78.326 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.160 - 1.510 |
R-factor | 0.1905 |
Rwork | 0.188 |
R-free | 0.21820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3qzs |
RMSD bond length | 0.007 |
RMSD bond angle | 1.004 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX (1.15.2_3472) |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.160 | 1.563 |
High resolution limit [Å] | 1.509 | 1.509 |
Rmerge | 0.049 | 0.329 |
Rmeas | 0.054 | 0.367 |
Rpim | 0.023 | 0.159 |
Number of reflections | 20911 | 2056 |
<I/σ(I)> | 25.22 | 5.95 |
Completeness [%] | 98.8 | 98.75 |
Redundancy | 5.1 | 4.9 |
CC(1/2) | 0.999 | 0.886 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.8 | 295 | 0.1 M bis-tris propane, 20% ethylene glycol, and 20% PEG3350 |