Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6UQ1

RNA polymerase II elongation complex with 5-guanidinohydantoin lesion in state 6

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyPIXEL
Collection date2019-03-23
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9767
Spacegroup nameC 1 2 1
Unit cell lengths170.502, 223.508, 194.943
Unit cell angles90.00, 101.58, 90.00
Refinement procedure
Resolution49.521 - 3.600
R-factor0.2409
Rwork0.240
R-free0.28740
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6blo
Data reduction softwareXDS
Data scaling softwareAimless (0.7.3)
Phasing softwarePHENIX
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.5213.600
High resolution limit [Å]3.5403.540
Rmerge0.4913.695
Rmeas0.5313.984
Rpim0.2001.481
Total number of observations33112
Number of reflections868754609
<I/σ(I)>5.10.6
Completeness [%]100.0100
Redundancy77.2
CC(1/2)0.9790.251
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5298390mM (NH4)2HPO4/NaH2PO4, pH 6.5, 5mM dioxane, 5mM DTT, 10-12% PEG6000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon