6UOG
Asparaginase II from Escherichia coli
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE W01B-MX2 |
Synchrotron site | LNLS |
Beamline | W01B-MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-08-30 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.459 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 139.989, 60.162, 151.108 |
Unit cell angles | 90.00, 117.31, 90.00 |
Refinement procedure
Resolution | 47.070 - 2.290 |
R-factor | 0.2265 |
Rwork | 0.225 |
R-free | 0.26220 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ihd |
RMSD bond length | 0.002 |
RMSD bond angle | 1.234 |
Data reduction software | XDS (VERSION Jan 26, 2018 BUILT=20180808) |
Data scaling software | XDS (VERSION Jan 26, 2018 BUILT=20180808) |
Phasing software | MrBUMP (00.9.00) |
Refinement software | REFMAC (5.8.0232) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.570 | 48.570 | 2.260 |
High resolution limit [Å] | 2.130 | 6.350 | 2.130 |
Rmerge | 0.084 | 0.059 | 0.358 |
Rmeas | 0.106 | 0.074 | 0.460 |
Total number of observations | 529056 | ||
Number of reflections | 214114 | 8652 | 25738 |
<I/σ(I)> | 7.66 | 16.62 | 2.09 |
Completeness [%] | 87.4 | 92.9 | 65 |
Redundancy | 2.471 | 2.507 | 2.168 |
CC(1/2) | 0.993 | 0.993 | 0.762 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.9 | 298 | 0.2 M Magnesium acetate tetrahydrate, 20% w/v Polyethylene glycol 3,350, L-Aspartic 1 mM |