6UL4
Crystal structure of BoNT/B receptor-binding domain in complex with VHH JLO-G11
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-03-06 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97918 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 56.299, 267.905, 144.693 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.379 - 3.184 |
R-factor | 0.206496836949 |
Rwork | 0.204 |
R-free | 0.25819 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2nm1 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.810 |
Data reduction software | XDS (1.9_1692) |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 144.690 | 3.400 |
High resolution limit [Å] | 3.180 | 3.180 |
Rmerge | 0.153 | |
Rpim | 0.138 | 1.682 |
Number of reflections | 18645 | 3299 |
<I/σ(I)> | 8.5 | |
Completeness [%] | 99.0 | |
Redundancy | 3.6 | |
CC(1/2) | 0.990 | 0.376 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | 20 % Ethanol, 0.1 M Tris |