6UHR
Crystal Structure of C148 mGFP-scDNA-2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-08-18 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.12710 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.580, 50.890, 209.190 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 52.350 - 3.000 |
R-factor | 0.2304 |
Rwork | 0.226 |
R-free | 0.30890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5n9o |
RMSD bond length | 0.008 |
RMSD bond angle | 1.825 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 104.595 | 69.730 | 3.160 |
High resolution limit [Å] | 3.000 | 9.490 | 3.000 |
Rmerge | 0.071 | 0.716 | |
Rmeas | 0.210 | 0.077 | 0.774 |
Rpim | 0.078 | 0.029 | 0.286 |
Total number of observations | 79211 | ||
Number of reflections | 11425 | 442 | 1631 |
<I/σ(I)> | 8 | 18.5 | 2.7 |
Completeness [%] | 99.7 | 99.8 | 100 |
Redundancy | 6.9 | 6.5 | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.4 | 295 | 1 microliter C148 mGFP-scDNA-2 (5 mg/mL (protein concentration) in 10 mM Tris Buffer pH 7.4, 137 mM NaCl) + 1 microliter crystallization condition (0.15 M potassium bromide, 30% (w/v) PEG 2000 MME) in a sitting drop with a 70 microliter reservoir (0.15 M potassium bromide, 30% (w/v) PEG 2000 MME) |