6UHP
Crystal Structure of C148 mGFP-ncDNA-1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2018-10-03 |
Detector | MAR scanner 300 mm plate |
Wavelength(s) | 0.97857 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 59.053, 51.605, 100.409 |
Unit cell angles | 90.00, 106.97, 90.00 |
Refinement procedure
Resolution | 56.480 - 2.900 |
R-factor | 0.3411 |
Rwork | 0.340 |
R-free | 0.37280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5n9o |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 96.037 | 56.482 | 3.060 |
High resolution limit [Å] | 2.900 | 9.170 | 2.900 |
Rmerge | 0.060 | 0.657 | |
Rmeas | 0.165 | 0.067 | 0.730 |
Rpim | 0.073 | 0.030 | 0.311 |
Total number of observations | 66203 | ||
Number of reflections | 13070 | 444 | 1895 |
<I/σ(I)> | 7.9 | 14.5 | 2.8 |
Completeness [%] | 99.8 | 98.4 | 100 |
Redundancy | 5.1 | 4.4 | 5.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 1 microliter C148 mGFP-ncDNA-1 (5 mg/mL (protein concentration) in 10 mM Tris Buffer pH 7.4, 137 mM NaCl) + 1 microliter crystallization condition (0.2 M sodium chloride, 0.1 M Bis-Tris Buffer pH 5.5, 25% (w/v) PEG 3350) in a sitting drop with a 70 microliter reservoir (0.2 M sodium chloride, 0.1 M Bis-Tris Buffer pH 5.5, 25% (w/v) PEG 3350) |