6UG0
N2-bound Nitrogenase MoFe-protein from Azotobacter vinelandii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 84.362, 156.967, 202.343 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.190 - 1.830 |
R-factor | 0.218 |
Rwork | 0.218 |
R-free | 0.25870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3u7q |
RMSD bond length | 0.009 |
RMSD bond angle | 0.993 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER (v2.8.3) |
Refinement software | PHENIX (v1.16-3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.860 |
High resolution limit [Å] | 1.830 | 1.830 |
Rmeas | 0.215 | 3.163 |
Rpim | 0.061 | 1.035 |
Number of reflections | 237283 | 225235 |
<I/σ(I)> | 11.5 | |
Completeness [%] | 95.2 | 94.8 |
Redundancy | 11.5 | 9 |
CC(1/2) | 0.994 | 0.352 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | 14-19 % w/v PEG smear high, 0.16M ammonium acetate, 0.1M sodium citrate (pH 5.0), 25.6 % v/v glycerol, 5mM Eu(II)-EGTA |