6U8F
RNA hairpin, bound with TNA monomer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 99 |
Detector technology | CCD |
Collection date | 2017-06-09 |
Detector | MAR CCD 130 mm |
Wavelength(s) | 1 |
Spacegroup name | H 3 |
Unit cell lengths | 69.631, 69.631, 70.514 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.830 - 2.810 |
R-factor | 0.176 |
Rwork | 0.175 |
R-free | 0.20900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vci |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.900 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.100 | 0.567 |
Rmeas | 0.111 | 0.647 |
Rpim | 0.047 | 0.304 |
Number of reflections | 3110 | 315 |
<I/σ(I)> | 15.7 | 1.42 |
Completeness [%] | 99.5 | 96 |
Redundancy | 5.4 | 4.1 |
CC(1/2) | 0.988 | 0.970 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291 | 1 M Lithium sulfate, 50 mM tri-Sodium citrate, 3 % w/v 2-Propanol, 50 mM HEPES; pH 7.5 |