6U7Y
RNA hairpin structure containing one TNA nucleotide as template
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 99 |
Detector technology | CCD |
Collection date | 2019-08-15 |
Detector | MAR CCD 130 mm |
Wavelength(s) | 1 |
Spacegroup name | H 3 |
Unit cell lengths | 68.766, 68.766, 69.960 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.350 - 2.950 |
R-factor | 0.186 |
Rwork | 0.182 |
R-free | 0.25600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vci |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.060 |
High resolution limit [Å] | 2.950 | 2.950 |
Rmerge | 0.116 | 0.332 |
Rmeas | 0.141 | 0.413 |
Rpim | 0.079 | 0.243 |
Number of reflections | 2599 | 263 |
<I/σ(I)> | 10.3 | 1.83 |
Completeness [%] | 98.5 | 89.6 |
Redundancy | 6 | 4.5 |
CC(1/2) | 1.000 | 0.956 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291 | 0.2 M Lithium sulfate monohydrate, 0.1 M HEPES pH 7.5, 25% w/v Polyethylene glycol 3,350 |