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6U6O

Crystal structure of a vaccine-elicited anti-HIV-1 rhesus macaque antibody DH846

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-BM
Synchrotron siteAPS
Beamline19-BM
Temperature [K]100
Detector technologyCCD
Collection date2019-08-07
DetectorADSC QUANTUM 315r
Wavelength(s)0.98
Spacegroup nameP 1 21 1
Unit cell lengths71.018, 36.991, 87.921
Unit cell angles90.00, 111.96, 90.00
Refinement procedure
Resolution43.844 - 2.806
R-factor0.2152
Rwork0.212
R-free0.27230
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6u6m
RMSD bond length0.003
RMSD bond angle0.693
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.900
High resolution limit [Å]2.8002.800
Rmeas0.757
Rpim0.437
Number of reflections92881097
<I/σ(I)>5.21.6
Completeness [%]85.2
Redundancy2.72.6
CC(1/2)0.9490.599
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2780.3M Magnesium chloride hexahydrate, 0.3M Calcium chloride dihydrate, 1.0M Imidazole; MES monohydrate (acid) pH6.5, 25% MPD, 25% PEG 1000, 25% PEG 3350

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