6U57
KDO8PS Structure Determined at the EuXFEL using Segmented Flow Injection
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | FREE ELECTRON LASER |
| Source details | EUROPEAN XFEL BEAMLINE SPB/SFX |
| Synchrotron site | European XFEL |
| Beamline | SPB/SFX |
| Temperature [K] | 293 |
| Detector technology | PIXEL |
| Collection date | 2017-09-20 |
| Detector | AGIPD |
| Wavelength(s) | 1.3316 |
| Spacegroup name | I 2 3 |
| Unit cell lengths | 118.000, 118.000, 118.000 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 48.000 - 2.800 |
| R-factor | 0.1924 |
| Rwork | 0.186 |
| R-free | 0.24890 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1x8f |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.471 |
| Data reduction software | CrystFEL (0.8.0) |
| Data scaling software | Aimless (0.7.4) |
| Phasing software | PHASER (2.8.3) |
| Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.000 | 2.900 |
| High resolution limit [Å] | 2.800 | 2.800 |
| Number of reflections | 6888 | 674 |
| <I/σ(I)> | 4.61 | 0.95 |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 184.2 | 147.4 |
| CC(1/2) | 0.637 | 0.417 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | BATCH MODE | 7.3 | 293 | 8.75-12 mg/mL KDO8PS in 20 mM Tris-HCl pH=7.3, 125 mM KCl, 2 mM beta-mercaptoethanol with 16-20% w/v poly(ethylene glycol) methyl ether |






