6U41
1.7 angstrom structure of a pathogenic human Syt 1 C2B (D304G)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-02-01 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.98397 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 54.290, 54.290, 103.770 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 34.590 - 1.700 |
R-factor | 0.1581 |
Rwork | 0.157 |
R-free | 0.17830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1uow |
RMSD bond length | 0.008 |
RMSD bond angle | 0.851 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.600 | 1.730 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.038 | 0.135 |
Rmeas | 0.039 | 0.141 |
Number of reflections | 20049 | 935 |
<I/σ(I)> | 50.7 | 15 |
Completeness [%] | 99.7 | 94.8 |
Redundancy | 18.4 | 12 |
CC(1/2) | 1.000 | 0.992 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 298 | 2.0 M Ammonium Sulfate, 0.1 M Sodium Acetate |