6U2D
PmtCD peptide exporter basket domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2018-10-10 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.541 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 150.190, 39.783, 56.499 |
Unit cell angles | 90.00, 108.94, 90.00 |
Refinement procedure
Resolution | 28.207 - 2.110 |
R-factor | 0.2142 |
Rwork | 0.209 |
R-free | 0.26050 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.075 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | SHELX |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.150 |
High resolution limit [Å] | 2.110 | 5.720 | 2.110 |
Rmerge | 0.085 | 0.042 | 0.570 |
Rmeas | 0.100 | 0.049 | 0.693 |
Rpim | 0.052 | 0.025 | 0.389 |
Total number of observations | 120418 | ||
Number of reflections | 33464 | 1747 | 1239 |
<I/σ(I)> | 8.8 | ||
Completeness [%] | 94.0 | 99 | 71.6 |
Redundancy | 3.6 | 3.8 | 2.7 |
CC(1/2) | 0.998 | 0.753 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 298 | 0.2 M ammonium sulfate, 0.1 M ammonium acetate pH 4.6 and 28% PEG MME 550 |