6TYD
Structure of human LDB1 in complex with SSBP2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-03-16 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9792 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 104.322, 104.322, 250.419 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.803 - 2.803 |
R-factor | 0.2439 |
Rwork | 0.240 |
R-free | 0.28120 |
Structure solution method | SAD |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.900 |
High resolution limit [Å] | 2.800 | 2.800 |
Number of reflections | 37297 | 1989 |
<I/σ(I)> | 38.73 | |
Completeness [%] | 99.8 | 99.4 |
Redundancy | 6.7 | 5.3 |
CC(1/2) | 0.991 | 0.513 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 295 | 100 mM lithium sulfate monohydrate, 100 mM sodium citrate tribasic dihydrate pH 5.6, 1% v/v PEG400, 10mM DTT |