6TSJ
Crystal structure of human L ferritin (HuLf) Fe(III)-loaded for 15 minutes
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-12-12 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.07227 |
Spacegroup name | I 4 3 2 |
Unit cell lengths | 151.907, 151.907, 151.907 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.890 - 2.300 |
Rwork | 0.195 |
R-free | 0.26230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5lg8 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.909 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.040 | 2.420 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.086 | 1.041 |
Rmeas | 0.091 | 1.089 |
Rpim | 0.020 | 0.232 |
Number of reflections | 13632 | 1952 |
<I/σ(I)> | 23.9 | 3.3 |
Completeness [%] | 100.0 | 100 |
Redundancy | 21.3 | 21.7 |
CC(1/2) | 1.000 | 0.901 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 293 | 80 mM cadmium nitrate, 80 mM ammonium sulfate, 200 mM sodium acetate, pH 4.6 |