6TR1
Native cytochrome c6 from Thermosynechococcus elongatus in space group H3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-17 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97626 |
Spacegroup name | H 3 |
Unit cell lengths | 94.800, 94.800, 160.220 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 36.530 - 1.700 |
R-factor | 0.1868 |
Rwork | 0.186 |
R-free | 0.20780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4eic |
RMSD bond length | 0.032 |
RMSD bond angle | 2.804 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA (3.3.21) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 73.065 | 36.533 | 1.250 |
High resolution limit [Å] | 1.189 | 3.760 | 1.190 |
Rmerge | 0.044 | 1.555 | |
Rmeas | 0.120 | 0.052 | 1.873 |
Rpim | 0.064 | 0.027 | 1.026 |
Total number of observations | 524507 | 17494 | 76258 |
Number of reflections | 170023 | 5287 | 24951 |
<I/σ(I)> | 4.7 | 21.8 | 0.8 |
Completeness [%] | 98.5 | 96.9 | 98.7 |
Redundancy | 3.1 | 3.3 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 278 | Ammonium sulfate, potassium nitrate |