6TPV
Crystal structures of FNIII domain one and two of the human leucocyte common antigen-related protein, LAR
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9794 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 63.270, 50.843, 65.525 |
Unit cell angles | 90.00, 97.22, 90.00 |
Refinement procedure
Resolution | 40.050 - 1.800 |
Rwork | 0.185 |
R-free | 0.22000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2dju |
RMSD bond length | 0.014 |
RMSD bond angle | 1.183 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (v1.16-3549-000) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.050 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmeas | 0.980 | |
Number of reflections | 37701 | 2761 |
<I/σ(I)> | 17.3 | 1.81 |
Completeness [%] | 97.8 | 97.4 |
Redundancy | 6.8 | 7.1 |
CC(1/2) | 0.999 | 0.888 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.3 | 277 | 0.2 M Sodium citrate tribasic dihydrate pH 8.3, 20 % PEG 3,350 |