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6TP8

Substrate protein interactions in the limbus region of the catalytic site of Candida antarctica Lipase B

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X13
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX13
Temperature [K]100
Detector technologyPIXEL
Collection date2013-09-22
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.824
Spacegroup nameC 2 2 21
Unit cell lengths89.426, 156.654, 138.084
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution67.690 - 1.550
R-factor0.1644
Rwork0.163
R-free0.19210
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1tca
RMSD bond length0.006
RMSD bond angle0.904
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]67.6901.605
High resolution limit [Å]1.5501.550
Rmerge0.1211.460
Rmeas0.1401.700
Rpim0.0500.877
Number of reflections13880648047
<I/σ(I)>8.41
Completeness [%]99.298.05
Redundancy7.67.2
CC(1/2)0.9970.550
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.8293Crystallization trials were performed at 293 K using the hanging-drop method using a Qiagen EasyXtal 15-well plate. A 15 mg.mL CALB solution in 20mM Na(CH3COO) pH = 4.8 was incubated with a solution of paraoxon-ethyl (SIGMA catalog n. N12816) 30mM in water for one day. 1 uL of CALB solution was diluted with 1 uL of the precipitant solution, made of 200mM Na(CH3COO) pH = 4.8, 20% (w.v) PEG4000, and 15% (v.v) glyceryl tributyrate (SIGMA catalog n. T8626). The drop was equilibrated by vapor diffusion against 500 uL of the precipitant solution. Protein crystals of the CALB complex appeared within two weeks and grew to a size of 0.1 x 0.1 x 0.05 mm3 in five weeks.

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