6TMD
Crystal structure of KANK2 ankyrin repeats mutant (A670V)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-28 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.915870 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 95.778, 45.659, 51.073 |
Unit cell angles | 90.00, 100.38, 90.00 |
Refinement procedure
Resolution | 47.150 - 1.500 |
R-factor | 0.1788 |
Rwork | 0.177 |
R-free | 0.22030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4hbd |
RMSD bond length | 0.009 |
RMSD bond angle | 1.565 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0232) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.150 | 1.521 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.056 | 2.239 |
Rmeas | 0.067 | 2.674 |
Rpim | 0.036 | 1.450 |
Number of reflections | 35000 | 1775 |
<I/σ(I)> | 10.3 | 0.5 |
Completeness [%] | 99.2 | 99.9 |
Redundancy | 3.4 | 3.2 |
CC(1/2) | 0.999 | 0.329 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.7 | 294 | 0.2 M ammonium acetate, 0.1 M Bis-tris pH 5.7, 31% w/v PEG 3350 |