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6TJG

Crystal structure of the computationally designed Cake8 protein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2018-11-26
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97625
Spacegroup nameP 1 21 1
Unit cell lengths34.368, 65.897, 71.027
Unit cell angles90.00, 92.64, 90.00
Refinement procedure
Resolution35.480 - 1.800
R-factor0.1786
Rwork0.176
R-free0.22460
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Computationally designed model cake8
RMSD bond length0.013
RMSD bond angle1.235
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.2801.840
High resolution limit [Å]1.8001.800
Rmerge0.0670.356
Rmeas0.0760.400
Rpim0.0340.180
Number of reflections293561704
<I/σ(I)>12.23.5
Completeness [%]99.899.9
Redundancy4.54.5
CC(1/2)0.9980.972
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293.150.18M Magnesium acetate, 0.09M Sodium, Cacodylate pH 6.5, 27% MPD, 15% Glycerol

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