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6TJC

Crystal structure of the computationally designed Cake3 protein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2018-11-26
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9795
Spacegroup nameP 2 21 21
Unit cell lengths51.541, 64.313, 106.090
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.360 - 1.900
R-factor0.172
Rwork0.170
R-free0.20610
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Computational design
RMSD bond length0.008
RMSD bond angle0.954
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.3601.940
High resolution limit [Å]1.9001.900
Rmerge0.0550.387
Rmeas0.0590.409
Rpim0.0200.132
Number of reflections285421793
<I/σ(I)>21.85.6
Completeness [%]100.0100
Redundancy8.65.6
CC(1/2)0.9990.957
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293.150.05M Potassium phosphate, 20% PEG8000

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