6THK
Structural mechanism of pyocin S5 import into Pseudomonas aeruginosa
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-05-06 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.9679 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.240, 53.870, 104.800 |
Unit cell angles | 90.00, 95.15, 90.00 |
Refinement procedure
Resolution | 52.190 - 2.200 |
R-factor | 0.227 |
Rwork | 0.225 |
R-free | 0.27500 |
Structure solution method | SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.080 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.700 | 2.270 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.138 | 1.946 |
Rmeas | 0.179 | 2.520 |
Rpim | 0.113 | 1.594 |
Number of reflections | 28285 | 2467 |
<I/σ(I)> | 4.9 | 0.7 |
Completeness [%] | 98.8 | 99.7 |
Redundancy | 4.4 | 4.6 |
CC(1/2) | 0.996 | 0.728 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291.15 | 10% w/v PEG 3000, 0.1 M sodium acetate, 0.1 M zinc acetate, pH 4.5 protein buffer: 25 mL Tris-HCl pH 7.5, 150 mM NaCl |