6TFU
Crystal Structure of EGFR T790M/V948R in Complex with Covalent Pyrrolopyrimidine 14d
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-02-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9791 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 76.430, 81.220, 89.920 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.960 - 2.000 |
R-factor | 0.2033 |
Rwork | 0.202 |
R-free | 0.23300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5j9z |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.960 | 2.100 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmeas | 0.068 | 1.171 |
Number of reflections | 38506 | 5179 |
<I/σ(I)> | 19.7 | 2.82 |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.71 | 13.49 |
CC(1/2) | 0.999 | 0.881 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 32.5 % PEG3350, 100 mM MgSO4, 3 % ethylen glycole 7.2 mg/mL EGFR T790M/V948R (in 100 mM NaCl, 25 mM Tris-HCl, 10 % glycerol, 1 mM TCEP, pH 8.0) 1 ul reservoir + 1 ul protein solution) |