6T8T
3C-like protease from Southampton virus complexed with FMOPL000603a.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-12-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.92819 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 63.090, 89.510, 61.070 |
Unit cell angles | 90.00, 97.55, 90.00 |
Refinement procedure
Resolution | 25.090 - 1.680 |
R-factor | 0.1258 |
Rwork | 0.122 |
R-free | 0.19390 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 6t1q |
RMSD bond length | 0.013 |
RMSD bond angle | 1.781 |
Data reduction software | xia2 |
Data scaling software | Aimless (0.5.29) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 25.090 | 25.070 | 1.720 |
High resolution limit [Å] | 1.680 | 7.510 | 1.680 |
Rmerge | 0.064 | 0.019 | 0.806 |
Rmeas | 0.076 | 0.023 | 0.967 |
Rpim | 0.041 | 0.012 | 0.529 |
Number of reflections | 38064 | 430 | 2797 |
<I/σ(I)> | 12 | 12 | 1.5 |
Completeness [%] | 99.4 | 94.8 | 99.7 |
Redundancy | 3.4 | 3.4 | 3.2 |
CC(1/2) | 0.998 | 0.999 | 0.534 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.1 | 294 | Protein concentration 4mg/ml. 0.2 M ammonium citrate and 12% (v/v) PEG3350. |