6T66
Crystal structure of the Vibrio cholerae replicative helicase (DnaB) with GDP-AlF4
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SOLEIL BEAMLINE PROXIMA 2 |
| Synchrotron site | SOLEIL |
| Beamline | PROXIMA 2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-03-31 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 0.9801 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 118.978, 123.292, 263.493 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 49.630 - 3.900 |
| R-factor | 0.256 |
| Rwork | 0.255 |
| R-free | 0.27600 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6qel |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.940 |
| Data reduction software | XDS (Mar 15, 2019) |
| Data scaling software | XDS (Mar 15, 2019) |
| Phasing software | MOLREP (Vers 11.7.01) |
| Refinement software | BUSTER (2.10.3) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 49.630 | 49.620 | 4.070 |
| High resolution limit [Å] | 3.900 | 17.650 | 3.900 |
| Rmerge | 0.226 | 0.080 | 3.860 |
| Rmeas | 0.293 | 0.083 | |
| Rpim | 0.055 | 0.022 | 1.009 |
| Number of reflections | 38678 | 440 | 2494 |
| <I/σ(I)> | 6.2 | ||
| Completeness [%] | 99.8 | 94.9 | 97.7 |
| Redundancy | 18.3 | 15.7 | 15.5 |
| CC(1/2) | 0.997 | 0.997 | 0.314 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 291 | 10% (v/v) MPD 0.1 M MES pH 6.0 |






