6T3U
PAS-GAF fragment from Deinococcus radiodurans phytochrome 1ps after photoexcitation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | FREE ELECTRON LASER |
Source details | SACLA BEAMLINE BL3 |
Synchrotron site | SACLA |
Beamline | BL3 |
Temperature [K] | 298 |
Detector technology | CCD |
Collection date | 2018-10-12 |
Detector | MPCCD |
Wavelength(s) | 1.7712 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.980, 116.690, 117.860 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.940 - 2.210 |
R-factor | 0.2317 |
Rwork | 0.230 |
R-free | 0.25620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5k5b |
RMSD bond length | 0.006 |
RMSD bond angle | 1.152 |
Data reduction software | CrystFEL |
Data scaling software | CrystFEL (0.6.3) |
Phasing software | PHASER (2.5.7) |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.460 | 2.250 |
High resolution limit [Å] | 2.210 | 2.210 |
Number of reflections | 39316 | 1512 |
<I/σ(I)> | 6.1 | 0.88 |
Completeness [%] | 100.0 | 100 |
Redundancy | 106.11 | 34.3 |
CC(1/2) | 0.980 | 0.380 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 4.95 | 298 | 60 mM Sodium Acetate, 3.3% PEG400, 1 mM DTT, 30% 2-methyl-2,4-pentanediol |