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6T3L

PAS-GAF fragment from Deinococcus radiodurans phytochrome in dark state

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeFREE ELECTRON LASER
Source detailsSACLA BEAMLINE BL3
Synchrotron siteSACLA
BeamlineBL3
Temperature [K]298
Detector technologyCCD
Collection date2018-10-12
DetectorMPCCD
Wavelength(s)1.7712
Spacegroup nameP 21 21 21
Unit cell lengths54.980, 116.690, 117.860
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.820 - 2.070
R-factor0.1627
Rwork0.161
R-free0.19220
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5k5b
RMSD bond length0.007
RMSD bond angle1.252
Data reduction softwareCrystFEL
Data scaling softwareCrystFEL (0.6.3)
Phasing softwarePHASER (2.5.7)
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.8702.100
High resolution limit [Å]2.0702.070
Number of reflections520602052
<I/σ(I)>9.210.83
Completeness [%]100.0100
Redundancy461.3565.9
CC(1/2)0.9900.330
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE4.9529860 mM Sodium Acetate, 3.3% PEG400, 1 mM DTT, 30% 2-methyl-2,4-pentanediol

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