Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6T1M

Crystal structure of MLLT1 (ENL) YEATS domain in complexed with benzimidazole-amide derivative 4

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06SA
Synchrotron siteSLS
BeamlineX06SA
Temperature [K]100
Detector technologyPIXEL
Collection date2018-09-21
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0000
Spacegroup nameP 43 21 2
Unit cell lengths49.069, 49.069, 129.992
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.910 - 1.850
R-factor0.2181
Rwork0.215
R-free0.27450
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6hq0
RMSD bond length0.012
RMSD bond angle1.261
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0253)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.07049.0701.910
High resolution limit [Å]1.8507.1701.850
Rmerge0.0870.0740.800
Rmeas0.0940.0790.875
Rpim0.0290.0260.267
Number of reflections143603221368
<I/σ(I)>10.62.1
Completeness [%]100.099.9100
Redundancy108.310.4
CC(1/2)0.9980.9980.930
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.5293.1525% PEG 3350, 0.2M sodium chloride, 0.1M bis-tris pH 5.5

239149

PDB entries from 2025-07-23

PDB statisticsPDBj update infoContact PDBjnumon